The Programme is administrated by the Special Interdepartmental Committee (SIC) , whose members are elected by the participating Schools. The current SIC was defined after the reestablishment of the Programme in 2018. The coordination of the Programme is performed by the Coordination Committee (CC). The Director and the Vice-Director of the Programme is elected by the Special Interdepartmental Committee.
Since its first establishment in September 1998, the Directors of the Programme were the following:
1998-2004 Professor Themistocles Xanthopoulos, 2004-2008 Professor George Chistodoulou, 2008-2010 Professor Andreas Andreadakis.
2010-2014 Professor Maria Mimikou, 2014-2016 Professor George Christodoulou, 2016-2022 Professor Anastasios Stamou, 2022-2024 Professor Daniel Mamais.